2 PhD Positions in Developmental Biology (m/f/d) – Emmy Noether Group, Dr. Ali Seleit

2 PhD Positions in Developmental Biology (m/f/d) – Emmy Noether Group, Dr. Ali Seleit

NEU

The Centre for Integrative Biological Signaling Studies (CIBSS) and the Faculty of Biology at the University of Freiburg are pleased to announce two open PhD positions in the newly founded Emmy-Noether funded research group of Dr. Ali Seleit.

Project Description

The successful candidates will drive independent research projects supported by the prestigious DFG Emmy-Noether Programme. Both PhD candidates will focus on projects utilizing the Japanese rice fish, Oryzias latipes (medaka) and related species, to further our understanding of the fundamental mechanisms underlying the control of developmental timing in vertebrates.

Key Methodologies in the Lab Include

• Genome editing : CRISPR/Cas9 microinjections in Oryzias species to generate knock-in (KI) lines and knock-outs (Crispants)
• Genetic hybridization : hybrid F1 and F2 families from different Oryzias species
• Multi-omics : scRNAseq, proteomics and metabolic profiling of Oryzias species
• Genomic analysis : building and annotating genomes of Oryzias species
• Advanced Imaging : 4D-confocal and light-sheet imaging of fluorescently tagged endogenous proteins during embryonic development in Oryzias species

Required Qualifications

• A Master's degree (or equivalent) in Biology, Molecular Medicine, Genetics, or a closely related field.
• Hands-on experience with standard molecular biology techniques (e.g. PCR, gel electrophoresis, molecular cloning and DNA/RNA sequencing).
• Basic coding and computational data analysis skills (e.g. Python, R, Imaris, Fiji).
• Strong critical thinking skills, high intrinsic motivation, and an independent, well-organized work style.

Highly Encouraged (but not required)

• Previous experience working with aquatic model systems (medaka, zebrafish, killifish).
• Experience with advanced light microscopy and quantitative image analysis.
• Experience with sequencing library preparation (DNA/RNA) or advanced computational data analysis (e.g. scRNAseq, proteomics, de-novo genome assembly and annotation).

What We Offer

• A fully funded DFG Emmy-Noether PhD position (65% E13) for 36 months, with the possibility of extension.
• A dynamic, collaborative, and interdisciplinary research environment within the CIBSS Cluster of Excellence and the Faculty of Biology at the University of Freiburg.
• Opportunities to contribute to cutting-edge research in developmental genetics and vertebrate biology.
• Supportive mentorship and training in advanced molecular, genomic, and imaging techniques.
• Integration into the Spemann Graduate School of Biology and Medicine (SGBM) at the University of Freiburg, offering structured thesis advisory committees and career development opportunities.

Further information on the lab you can find:

How to Apply

Please submit your complete application in English – including a cover letter detailing your research interests and motivation, a CV, relevant transcripts/certificates, and the contact details of two academic references – as a single PDF document.

The position is limited to 31 May 2029. The salary will be determined in accordance with E13 TV-L.

We will be particularly pleased to receive applications from women for the position advertised here.

Bewerbung

Please send your application in English including supporting documents mentioned above citing the reference number , by 30 April 2026 at the latest. Please send your application to the following address in written or electronic form:

Please send your application electronically via e-mail, citing the reference PhD-Seleit-2026, to by at the latest.

For further information, please contact Frau Kathrin Pensold on the phone number or E-Mail

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